caffeine molecule

MANTP

Molecular and Applied Nutrition Training Program
at the University of Wisconsin-Madison

-Predoctoral and Postdoctoral Training in Nutrition-

  Trainee Publications

1996

Beckman, M. J., P. Tadikonda, E. Werner, J. Prahl, S. Yamada, and H. F. DeLuca. 1996. Human 25-hydroxyvitamin D3-24-hydroxylase, a multicatalytic enzyme. Biochemistry 35:8465-72.

Leeuwenburgh, C., S. Leichtweis, J. Hollander, R. Fiebig, M. Gore, and L. L. Ji. 1996. Effect of acute exercise on glutathione deficient heart. Mol Cell Biochem 156:17-24.

Mohamed, M. I., M. J. Beckman, J. Meehan, and H. F. DeLuca. 1996. Effect of 1,25-dihydroxyvitamin D3 on mouse thymus: role of extracellular calcium. Biochim Biophys Acta 1289:275-83.

1997

Beckman, M. J., and H. F. DeLuca. 1997. Assay of 25-hydroxyvitamin D 1 alpha-hydroxylase and 24-hydroxylase. Methods Enzymol 282:200-13.

Leeuwenburgh, C., J. Hollander, S. Leichtweis, M. Griffiths, M. Gore, and L. L. Ji. 1997. Adaptations of glutathione antioxidant system to endurance training are tissue and muscle fiber specific. Am J Physiol 272:R363-9.

Lo, H. C., M. D. Hirvonen, K. R. Kritsch, R. E. Keesey, and D. M. Ney. 1997. Growth hormone or insulin-like growth factor I increases fat oxidation and decreases protein oxidation without altering energy expenditure in parenterally fed rats. Am J Clin Nutr 65:1384-90.

Wu, W., J. D. Bancroft, and J. W. Suttie. 1997. Structural features of the kringle domain determine the intracellular degradation of under-gamma-carboxylated prothrombin: studies of chimeric rat/human prothrombin. Proc Natl Acad Sci USA 94:13654-60.

1998

Beckman, M. J., and H. F. Deluca. 1998. Modern view of vitamin D3 and its medicinal uses. Prog Med Chem 35:1-56.

Gore, M., R. Fiebig, J. Hollander, C. Leeuwenburgh, H. Ohno, and L. L. Ji. 1998. Endurance training alters antioxidant enzyme gene expression in rat skeletal muscle. Can J Physiol Pharmacol 76:1139-45.

Hollander, J., M. Gore, R. Fiebig, R. Mazzeo, S. Ohishi, H. Ohno, and L. L. Ji. 1998. Spaceflight downregulates antioxidant defense systems in rat liver. Free Radic Biol Med 24:385-90.

Ji, L. L., C. Leeuwenburgh, S. Leichtweis, M. Gore, R. Fiebig, J. Hollander, and J. Bejma. 1998. Oxidative stress and aging. Role of exercise and its influences on antioxidant systems. Ann N Y Acad Sci 854:102-17.

1999

Garber, A. K., N. C. Binkley, D. C. Krueger, and J. W. Suttie. 1999. Comparison of phylloquinone bioavailability from food sources or a supplement in human subjects. J Nutr 129:1201-3.

Hollander, J., R. Fiebig, M. Gore, J. Bejma, T. Ookawara, H. Ohno, and L. L. Ji. 1999. Superoxide dismutase gene expression in skeletal muscle: fiber-specific adaptation to endurance training. Am J Physiol 277:R856-62.

Ney, D. M., D. J. Huss, M. B. Gillingham, K. R. Kritsch, E. M. Dahly, J. L. Talamantez, and M. L. Adamo. 1999. Investigation of insulin-like growth factor (IGF)-I and insulin receptor binding and expression in jejunum of parenterally fed rats treated with IGF-I or growth hormone. Endocrinology 140:4850-60.

Wu, W., and J. W. Suttie. 1999. N-glycosylation contributes to the intracellular stability of prothrombin precursors in the endoplasmic reticulum. Thromb Res 96:91-8

 

2000

Bartok-Olson, C. J., D. A. Schoeller, J. C. Sullivan, and R. R. Clark. 2000. The "B" in the Selinger Four-Compartment body composition formula should be body mineral instead of bone mineral. Ann N Y Acad Sci 904:342-4.

Hollander, J., J. Bejma, T. Ookawara, H. Ohno, and L. L. Ji. 2000. Superoxide dismutase gene expression in skeletal muscle: fiber-specific effect of age. Mech Ageing Dev 116:33-45.

Kritsch, K. R., D. J. Huss, and D. M. Ney. 2000. Greater potency of IGF-I than IGF-I/BP-3 complex in catabolic parenterally fed rats. Am J Physiol Endocrinol Metab 278:E252-62.

Lai, H., S. C. FitzSimmons, D. B. Allen, M. R. Kosorok, B. J. Rosenstein, P. W. Campbell, and P. M. Farrell. 2000. Risk of persistent growth impairment after alternate-day prednisone treatment in children with cystic fibrosis. N Engl J Med 342:851-9.

Lai, H., M. R. Kosorok, A. Laxova, L. A. Davis, S. C. FitzSimmon, and P. M. Farrell. 2000. Nutritional status of patients with cystic fibrosis with meconium ileus: a comparison with patients without meconium ileus and diagnosed early through neonatal screening. Pediatrics 105:53-61.

Gillingham, M. B., E. M. Dahly, H. V. Carey, M. D. Clark, K. R. Kritsch, and D. M. Ney. 2000. Differential jejunal and colonic adaptation due to resection and IGF-I in parenterally fed rats. Am J Physiol Gastrointest Liver Physiol 278:G700-9.

Schoeller, D. A., A. S. Colligan, T. Shriver, H. Avak, and C. Bartok-Olson. 2000. Use of an automated chromium reduction system for hydrogen isotope ratio analysis of physiological fluids applied to doubly labeled water analysis. J Mass Spectrom 35:1128-32.

Twisk, J., D. L. Gillian-Daniel, D. L. Tebon, L. Wang, P. H. Barrett, and A. D. Attie. 2000. The role of the LDL receptor in apolipoprotein B secretion. J Clin Invest 105:521-32.

 

2001

Bene, H., D. Lasky, and J. M. Ntambi. 2001. Cloning and characterization of the human stearoyl-CoA desaturase gene promoter: transcriptional activation by sterol regulatory element binding protein and repression by polyunsaturated fatty acids and cholesterol. Biochem Biophys Res Commun 284:1194-8.

Brickson, S., J. Hollander, D. T. Corr, L. L. Ji, and T. M. Best. 2001. Oxidant production and immune response after stretch injury in skeletal muscle. Med Sci Sports Exerc 33:2010-5.

Farrell, P. M., M. R. Kosorok, M. J. Rock, A. Laxova, L. Zeng, H. Lai, G. Hoffman, R. H. Laessig, and M. L. Splaingard. 2001. Early diagnosis of cystic fibrosis through neonatal screening prevents severe malnutrition and improves long-term growth. Wisconsin Cystic Fibrosis Neonatal Screening Study Group. Pediatrics 107:1-13

Fiebig, R. G., J. M. Hollander, and L. L. Ji. 2001. Exercise down-regulates hepatic fatty acid synthase in streptozotocin-treated rats. J Nutr 131:2252-9.

Gillingham, M. B., K. R. Kritsch, S. G. Murali, P. K. Lund, and D. M. Ney. 2001. Resection upregulates the IGF-I system of parenterally fed rats with jejunocolic anastomosis. Am J Physiol Gastrointest Liver Physiol 281:G1158-68.

Heuberger, R. A., J. A. Mares-Perlman, R. Klein, B. E. Klein, A. E. Millen, and M. Palta. 2001. Relationship of dietary fat to age-related maculopathy in the Third National Health and Nutrition Examination Survey. Arch Ophthalmol 119:1833-8.

Hollander, J., R. Fiebig, M. Gore, T. Ookawara, H. Ohno, and L. L. Ji. 2001. Superoxide dismutase gene expression is activated by a single bout of exercise in rat skeletal muscle. Pflugers Arch 442:426-34.

Mares-Perlman, J. A., A. I. Fisher, R. Klein, M. Palta, G. Block, A. E. Millen, and J. D. Wright. 2001. Lutein and zeaxanthin in the diet and serum and their relation to age-related maculopathy in the third national health and nutrition examination survey. Am J Epidemiol 153:424-32.

Ntambi, J. M., and H. Bene. 2001. Polyunsaturated fatty acid regulation of gene expression. J Mol Neurosci 16:273-8; discussion 279-84.

 

2002

Beckman, M. J., and H. F. DeLuca. 2002. Regulation of renal vitamin D receptor is an important determinant of 1alpha,25-dihydroxyvitamin D(3) levels in vivo. Arch Biochem Biophys 401:44-52.

Fiebig, R. G., J. M. Hollander, D. Ney, R. Boileau, E. Jeffery, and L. L. Ji. 2002. Training down-regulates fatty acid synthase and body fat in obese Zucker rats. Med Sci Sports Exerc 34:1106-14.

Gillian-Daniel, D. L., P. W. Bates, A. Tebon, and A. D. Attie. 2002. Endoplasmic reticulum localization of the low density lipoprotein receptor mediates presecretory degradation of apolipoprotein B. Proc Natl Acad Sci U S A 99:4337-42.

Kritsch, K. R., S. Murali, M. L. Adamo, and D. M. Ney. 2002. Dexamethasone decreases serum and liver IGF-I and maintains liver IGF-I mRNA in parenterally fed rats. Am J Physiol Regul Integr Comp Physiol 282:R528-36.

Lai, H., M. R. Kosorok, A. Laxova, L. M. Makholm, and P. M. Farrell. 2002. Delayed diagnosis of US females with cystic fibrosis. Am J Epidemiol 156:165-73.

Mares-Perlman, J. A., A. E. Millen, T. L. Ficek, and S. E. Hankinson. 2002. The body of evidence to support a protective role for lutein and zeaxanthin in delaying chronic disease. Overview. J Nutr 132:518S-524S.

 

2003

Bartok, C., R. L. Atkinson, and D. A. Schoeller. 2003. Measurement of nutritional status in simulated microgravity by bioelectrical impedance spectroscopy. J Appl Physiol 95:225-32.

Clark, R. R., J. C. Sullivan, C. Bartok, and D. A. Schoeller. 2003. Multicomponent cross-validation of minimum weight predictions for college wrestlers. Med Sci Sports Exerc 35:342-7.

Dahly, E. M., M. B. Gillingham, Z. Guo, S. G. Murali, D. W. Nelson, J. J. Holst, and D. M. Ney. 2003. Role of luminal nutrients and endogenous GLP-2 in intestinal adaptation to mid-small bowel resection. Am J Physiol Gastrointest Liver Physiol 284:G670-82.

Farrell, P. M., Z. Li, M. R. Kosorok, A. Laxova, C. G. Green, J. Collins, H. Lai, L. M. Makholm, M. J. Rock, and M. L. Splaingard. 2003. Longitudinal evaluation of bronchopulmonary disease in children with cystic fibrosis. Pediatr Pulmonol 36:230-40.

Farrell, P. M., Z. Li, M. R. Kosorok, A. Laxova, C. G. Green, J. Collins, H. Lai, M. J. Rock, and M. L. Splaingard. 2003. Bronchopulmonary disease in children with cystic fibrosis after early or delayed diagnosis. Am J Respir Crit Care Med 168:1100-8. 33.

Millen, A. E., M. Gruber, R. Klein, B. E. Klein, M. Palta, and J. A. Mares. 2003. Relations of serum ascorbic acid and alpha-tocopherol to diabetic retinopathy in the Third National Health and Nutrition Examination Survey. Am J Epidemiol 158:225-33.

Moeller, S. M., and J. A. Mares. 2003. Ethnic differences in diet and age-related maculopathies. Int Ophthalmol Clin 43:47-59.

Mulligan, J. D., M. T. Flowers, A. Tebon, J. J. Bitgood, C. Wellington, M. R. Hayden, and A. D. Attie. 2003. ABCA1 is essential for efficient basolateral cholesterol efflux during the absorption of dietary cholesterol in chickens. J Biol Chem 278:13356-66.

 

2004

Bartok, C., and D. A. Schoeller. 2004. Estimation of segmental muscle volume by bioelectrical impedance spectroscopy. J Appl Physiol 96:161-6.

Bartok, C., D. A. Schoeller, R. Randall Clark, J. C. Sullivan, and G. L. Landry. 2004. The effect of dehydration on wrestling minimum weight assessment. Med Sci Sports Exerc 36:160-7.

Bartok, C., D. A. Schoeller, J. C. Sullivan, R. R. Clark, and G. L. Landry. 2004. Hydration testing in collegiate wrestlers undergoing hypertonic dehydration. Med Sci Sports Exerc 36:510-7.

Bradley, J., E. A. Leibold, Z. L. Harris, J. D. Wobken, S. Clarke, K. B. Zumbrennen, R. S. Eisenstein, and M. K. Georgieff. 2004. Influence of gestational age and fetal iron status on IRP activity and iron transporter protein expression in third-trimester human placenta. Am J Physiol Regul Integr Comp Physiol 287:R894-901.

Buchholz, A. C., C. Bartok, and D. A. Schoeller. 2004. The validity of bioelectrical impedance models in clinical populations. Nutr Clin Pract 19:433-46.

Clark, R. R., C. Bartok, J. C. Sullivan, and D. A. Schoeller. 2004. Minimum weight prediction methods cross-validated by the four-component model. Med Sci Sports Exerc 36:639-47.

Ellis, C. D., F. Wang, C. W. MacDiarmid, S. Clark, T. Lyons, and D. J. Eide. 2004. Zinc and the Msc2 zinc transporter protein are required for endoplasmic reticulum function. J Cell Biol 166:325-35.

Gruber, M., R. Chappell, A. Millen, T. LaRowe, S. M. Moeller, A. Iannaccone, S. B. Kritchevsky, and J. Mares. 2004. Correlates of serum lutein + zeaxanthin: findings from the Third National Health and Nutrition Examination Survey. J Nutr 134:2387-94.

Koscik, R. L., P. M. Farrell, M. R. Kosorok, K. M. Zaremba, A. Laxova, H. Lai, J. A. Douglas, M. J. Rock, and M. L. Splaingard. 2004. Cognitive function of children with cystic fibrosis: deleterious effect of early malnutrition. Pediatrics 113:1549-58. 37.

Lai, H., Y. Cheng, H. Cho, M. R. Kosorok, and P. M. Farrell. 2004. Association between initial disease presentation, lung disease outcomes, and survival in patients with cystic fibrosis. Am J Epidemiol 159:537-46.

Li, Z., H. Lai, M. R. Kosorok, A. Laxova, M. J. Rock, M. L. Splaingard, and P. M. Farrell. 2004. Longitudinal pulmonary status of cystic fibrosis children with meconium ileus. Pediatr Pulmonol 38:277-84.

Millen, A. E., R. Klein, A. R. Folsom, J. Stevens, M. Palta, and J. A. Mares. 2004. Relation between intake of vitamins C and E and risk of diabetic retinopathy in the Atherosclerosis Risk in Communities Study. Am J Clin Nutr 79:865-73.

Pitula, J. S., K. M. Deck, S. L. Clarke, S. A. Anderson, A. Vasanthakumar, and R. S. Eisenstein. 2004. Selective inhibition of the citrate-to-isocitrate reaction of cytosolic aconitase by phosphomimetic mutation of serine-711. Proc Natl Acad Sci U S A 101:10907-12.

Stoehr, J. P., J. E. Byers, S. M. Clee, H. Lan, I. V. Boronenkov, K. L. Schueler, B. S. Yandell, and A. D. Attie. 2004. Identification of major quantitative trait loci controlling body weight variation in ob/ob mice. Diabetes 53:245-9.

 

2005

Clark, R. R., C. Bartok, J. C. Sullivan, and D. A. Schoeller. 2005. Is leg-to-leg BIA valid for predicting minimum weight in wrestlers? Med Sci Sports Exerc 37:1061-8.

Ellis, C. D., C. W. Macdiarmid, and D. J. Eide. 2005. Heteromeric protein complexes mediate zinc transport into the secretory pathway of eukaryotic cells. J Biol Chem 280:28811-8.

Farrell, P. M., H. Lai, Z. Li, M. R. Kosorok, A. Laxova, C. G. Green, J. Collins, G. Hoffman, R. Laessig, M. J. Rock, and M. L. Splaingard. 2005. Evidence on improved outcomes with early diagnosis of cystic fibrosis through neonatal screening: enough is enough! J Pediatr 147:S30-6.

Kritsch, K. R., S. Murali, M. L. Adamo, M. K. Clayton, and D. M. Ney. 2005. Hypoenergetic high-carbohydrate or high-fat parenteral nutrition induces a similar metabolic response with differential effects on hepatic IGF-I mRNA in dexamethasone-treated rats. J Nutr 135:479-85.

Murali, S. G., D. W. Nelson, A. K. Draxler, X. Liu, and D. M. Ney. 2005. Insulin-like growth factor-I (IGF-I) attenuates jejunal atrophy in association with increased expression of IGF-I binding protein-5 in parenterally fed mice. J Nutr 135:2553-9.

Rincker, M. J., S. L. Clarke, R. S. Eisenstein, J. E. Link, and G. M. Hill. 2005. Effects of iron supplementation on binding activity of iron regulatory proteins and the subsequent effect on growth performance and indices of hematological and mineral status of young pigs. J Anim Sci 83:2137-45.

 

2006

Clagett-Dame, M., E. M. McNeill, and P. D. Muley. 2006. Role of all-trans retinoic acid in neurite
outgrowth and axonal elongation. J Neurobiol 66:739-56.

Clarke, S. L., A. Vasanthakumar, S. A. Anderson, C. Pondarre, C. M. Koh, K. M. Deck, J. S. Pitula, C. J. Epstein, M. D. Fleming, and R. S. Eisenstein. 2006. Iron-responsive degradation of iron-regulatory protein 1 does not require the Fe-S cluster. EMBO J 25:544-53.

Clee, S. M., B. S. Yandell, K. M. Schueler, M. E. Rabaglia, O. C. Richards, S. M. Raines, E. A. Kabara, D. M. Klass, E. T. Mui, D. S. Stapleton, M. P. Gray-Keller, M. B. Young, J. P. Stoehr, H. Lan, I. Boronenkov, P. W. Raess, M. T. Flowers, and A. D. Attie. 2006. Positional cloning of Sorcs1, a type 2 diabetes quantitative trait locus. Nat Genet 38:688-93.

Flowers, M. T., M. Miyazaki, X. Liu, and J. M. Ntambi. 2006. Probing the role of stearoyl-CoA desaturase-1 in hepatic insulin resistance. J Clin Invest 116:1478-81.

Flowers, M. T., A. K. Groen, A. T. Oler, M. P. Keller, Y. Choi, K. L. Schueler, O. C. Richards, H. Lan, M. Miyazaki, F. Kuipers, C. M. Kendziorski, J. M. Ntambi, and A. D. Attie. 2006. Cholestasis and hypercholesterolemia in SCD1-deficient mice fed a low-fat, high-carbohydrate diet. J Lipid Res 47:2668-80.

Lan H, Chen M, Flowers J Byers, Yandell BS, Stapleton DS, Mata CM, Mui ET, Flowers MT, Schueler KL, Manly KF, Williams RW, Kendziorski C, Attie AD.  Combined expression trait correlations and expression quantitative trait locus mapping.  PLos Genet 2006 ; 2(1):e6.

Pondarre, C., B. B. Antiochos, D. R. Campagna, S. L. Clarke, E. L. Greer, K. M. Deck, A. McDonald, A. P. Han, A. Medlock, J. L. Kutok, S. A. Anderson, R. S. Eisenstein, and M. D. Fleming. 2006. The mitochondrial ATP-binding cassette transporter Abcb7 is essential in mice and participates in cytosolic iron-sulfur cluster biogenesis. Hum Mol Genet 15:953-64.

 

2007

Baumler, M. D., D. W. Nelson, D. M. Ney, and G. E. Groblewski. 2007. Loss of exocrine pancreatic stimulation during parenteral feeding suppresses digestive enzyme expression and induces Hsp70 expression. Am J Physiol Gastrointest Liver Physiol 292:G857-66.

Flowers, J. B., A. T. Oler, S. T. Nadler, Y. Choi, K. L. Schueler, B. S. Yandell, C. M. Kendziorski, and A. D. Attie. 2007. Abdominal obesity in BTBR male mice is associated with peripheral but not hepatic insulin resistance. Am J Physiol Endocrinol Metab 292:E936-45

Flowers, J. B., M. E. Rabaglia, K. L. Schueler, M. T. Flowers, H. Lan, M. P. Keller, J. M. Ntambi, and A. D. Attie. 2007. Loss of Stearoyl-CoA Desaturase-1 Improves Insulin Sensitivity in Lean Mice but Worsens Diabetes in Leptin-deficient Obese Mice. Diabetes  53:245-9.

Murali, S. G., X. Liu, D. W. Nelson, A. K. Hull, M. Grahn, M. K. Clayton, J. E. Pintar, and D. M. Ney. 2007. The Intestinotrophic Effects of Exogenous Insulin-Like Growth Factor-I (IGF-I) Are Not Diminished in IGF Binding Protein-5 Knock-Out Mice. Am J Physiol Regul Integr Comp Physiol.

Nelson, D. W., J. W. Sharp, M. S. Brownfield, H. E. Raybould, and D. M. Ney. 2007. Localization and activation of glucagon-like Peptide-2 receptors on vagal afferents in the rat. Endocrinology 148:1954-62.

 

 

Back to Interdepartmental Graduate Program in Nutritional Sciences